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  5. Cre09.g397350

Cre09.g397350 (30781526)


Aliases : 30781526

Description : Regulator of telomere elongation helicase 1 homolog OS=Arabidopsis thaliana


Gene families : OG_01_0000361 (OrthoFinder) Phylogenetic Tree(s): OG0000361_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g397350
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Cz02g00030.t1 No alias ATP-dependent helicase, C-terminal; DEAD2 [Interproscan]. 0.05 OrthoFinder
OT_04G00710.1 No alias ATP-dependent helicase, C-terminal; DNA polymerase... 0.04 OrthoFinder
OT_08G00240.1 No alias ATP-dependent helicase, C-terminal; DEAD2 [Interproscan]. 0.02 OrthoFinder
OT_16G01260.1 No alias ATP-dependent helicase, C-terminal; DEAD2 [Interproscan]. 0.03 OrthoFinder
Sro1149_g246570.1 Contig1585.g14401 Regulator of telomere elongation helicase 1 0.03 OrthoFinder
Sro13_g010240.1 Contig337.g4565 Helicase CHL1 0.02 OrthoFinder
Vocar.0021s0177.1 32895947 ATP-dependent helicase, C-terminal; DEAD2 [Interproscan]. 0.02 OrthoFinder
XM_003063818.1 MicpuC2_4429, 4429 ATP-dependent helicase, C-terminal [Interproscan]. 0.02 OrthoFinder
XM_003063893.1 MicpuC2_30088, 30088 ATP-dependent helicase, C-terminal; DEAD2 [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01001680.1_cds_GFH20692.1_15169 HaLaN_17856, GFH20692 DEAD2 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000023.1_cds_PRW20458.1_5459 PRW20458 Putative ATP-dependent RNA helicase DDX11 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003678 DNA helicase activity IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
InterPro domains Description Start Stop
IPR010614 DEAD_2 206 365
IPR006555 ATP-dep_Helicase_C 753 938
No external refs found!