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  5. Cre09.g396139

Cre09.g396139 (30780743)


Aliases : 30780743

Description : Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana


Gene families : OG_01_0000282 (OrthoFinder) Phylogenetic Tree(s): OG0000282_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g396139
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cz06g22140.t1 No alias Domain of unknown function DUF5599; DNA2/NAM7 helicase,... 0.02 OrthoFinder
EOD22247 No alias DNA2/NAM7 helicase-like, AAA domain; DNA2/NAM7 helicase,... 0.01 OrthoFinder
EOD32017 No alias Domain of unknown function DUF5599; RNA helicase UPF1,... 0.01 OrthoFinder
Vocar.0001s0794.1 32885484 DNA2/NAM7 helicase, AAA domain; DNA2/NAM7 helicase-like,... 0.02 OrthoFinder
Vocar.0019s0207.1 32892639 DNA2/NAM7 helicase, AAA domain; DNA2/NAM7 helicase-like,... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004531 deoxyribonuclease II activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
MF GO:0008131 primary amine oxidase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR041677 DNA2/NAM7_AAA_11 773 852
IPR041677 DNA2/NAM7_AAA_11 635 758
IPR041679 DNA2/NAM7-like_C 863 1102
No external refs found!