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  5. Cpa|evm.model.tig00000404.3

Cpa|evm.model.tig00000404.3 (tig00000404_g369.t1)


Aliases : tig00000404_g369.t1

Description : Photosynthesis.photorespiration.glycerate:glycolate transporter


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000404.3
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Dusal.0071s00015.1 33185715 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.05 OrthoFinder
Transcript_contig_1467 1467 Hypothetical protein 0.03 OrthoFinder
UNPLg00269.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0860.1 32886041 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 229 277
IPR000408 Reg_chr_condens 69 117
IPR000408 Reg_chr_condens 6 50
IPR000408 Reg_chr_condens 126 168
IPR007300 CidB/LrgB 783 880
No external refs found!