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  5. Cre09.g394700

Cre09.g394700 (30780279)


Aliases : 30780279

No description available


Gene families : OG_01_0001390 (OrthoFinder) Phylogenetic Tree(s): OG0001390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g394700
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000863.28 tig00000863_g4982.t1 No description available 0.02 OrthoFinder
Cz02g21350.t1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_06G04340.1 No alias Metallo-beta-lactamase [Interproscan]. 0.05 OrthoFinder
PTI_24G00760.1 No alias Metallo-beta-lactamase [Interproscan]. 0.03 OrthoFinder
Sro2704_g335160.1 Contig3387.g26485 Ribonuclease Z 0.02 OrthoFinder
XM_003059866.1 MicpuC2_18700, 18700 Metallo-beta-lactamase [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR003034 SAP_dom 193 224
No external refs found!