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  5. Cre09.g394399

Cre09.g394399 (30780529)


Aliases : 30780529

No description available


Gene families : OG_01_0002261 (OrthoFinder) Phylogenetic Tree(s): OG0002261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g394399
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.45 tig00022075_g23606.t1 No description available 0.06 OrthoFinder
Cz16g17190.t1 No alias Sas10 C-terminal domain [Interproscan]. 0.15 OrthoFinder
Cz16g17200.t1 No alias Sas10/Utp3/C1D [Interproscan]. 0.2 OrthoFinder
Dusal.0221s00003.1 33197579 Sas10 C-terminal domain; Sas10/Utp3/C1D [Interproscan]. 0.01 OrthoFinder
EOD14890 No alias Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. 0.14 OrthoFinder
OT_02G03770.1 No alias Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. 0.21 OrthoFinder
PTI_01G09370.1 No alias Sas10 C-terminal domain [Interproscan]. 0.22 OrthoFinder
PTI_04G05740.1 No alias Hypothetical protein 0.08 OrthoFinder
Sro408_g136920.1 Contig3193.g25227 About silencing protein 10 0.25 OrthoFinder
Sro98_g050440.1 Contig3362.g26336 Inherit from NOG: Neuroguidin, EIF4E binding protein 0.07 OrthoFinder
TP03G07600.1 No alias Sas10/Utp3/C1D [Interproscan]. 0.09 OrthoFinder
TP14G02810.1 No alias Sas10 C-terminal domain [Interproscan]. 0.07 OrthoFinder
Vocar.0009s0185.1 32893539 Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. 0.07 OrthoFinder
XM_002502780.1 MICPUN_59233, 59233 Sas10 C-terminal domain; Sas10/Utp3/C1D [Interproscan]. 0.19 OrthoFinder
XM_003060898.1 MicpuC2_60704, 60704 Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. 0.12 OrthoFinder
lcl|BLLF01001084.1_cds_GFH17015.1_11492 HaLaN_13548, GFH17015 Sas10 domain-containing protein 0.1 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45524.1_1307 PRW45524 Something about silencing 10 0.29 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497949.1_6902 KAA8497949 Neuroguidin 0.12 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Enrichment
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR018972 Sas10_C_dom 719 792
IPR007146 Sas10/Utp3/C1D 272 352
No external refs found!