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  5. Cre09.g392542

Cre09.g392542 (30780316)


Aliases : 30780316

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class II/ASH1 histone methyltransferase component


Gene families : OG_01_0000051 (OrthoFinder) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g392542
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.148 tig00020553_g10639.t1 Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.02 OrthoFinder
Cz03g13010.t1 No alias PWWP domain; SET domain; AWS domain [Interproscan]. 0.02 OrthoFinder
Cz04g17250.t1 No alias AWS domain; SET domain; Zinc finger, CW-type [Interproscan]. 0.03 OrthoFinder
Dusal.0025s00024.1 33200721 FY-rich, C-terminal; Zinc finger, PHD-finger; FY-rich,... 0.02 OrthoFinder
OT_14G01610.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
PTI_22G01600.1 No alias SET domain; PWWP domain; Zinc finger, PHD-finger;... 0.02 OrthoFinder
Sro157_g071400.1 Contig2362.g19430 36 and H4 lysine-20 specific 0.01 OrthoFinder
Sro2775_g336830.1 Contig927.g9706 Lysine N-methyltransferase, H3 lysine-4 specific 0.02 OrthoFinder
Sro84_g045070.1 Contig220.g2640 36 and H4 lysine-20 specific 0.02 OrthoFinder
Vocar.0004s0182.1 32889980 SET domain [Interproscan]. 0.02 OrthoFinder
Vocar.0021s0176.1 32895868 SET domain; AWS domain; PWWP domain [Interproscan]. 0.03 OrthoFinder
Vocar.0044s0031.1 32896567 Zinc finger, CW-type; SET domain; AWS domain [Interproscan]. 0.02 OrthoFinder
XM_003062458.1 MicpuC2_68459, 68459 Set domain protein 0.03 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39193.1_2673 PRW39193 Histone-lysine N-methyltransferase ATX2-like 0.04 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495732.1_1730 KAA8495732 Histone-lysine N-methyltransferase, H3 lysine-36 and H4... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 210 316
IPR011124 Znf_CW 50 95
IPR006560 AWS_dom 163 196
No external refs found!