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Aliases : 30780641
Description : Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana
Gene families : OG_01_0003770 (OrthoFinder) Phylogenetic Tree(s): OG0003770_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre09.g391652 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020610.71 | tig00020610_g12015.t1 | Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana | 0.04 | OrthoFinder | |
| Cpa|evm.model.tig00020610.72 | tig00020610_g12016.t1 | No description available | 0.04 | OrthoFinder | |
| Cz06g01210.t1 | No alias | Nucleolar complex protein 2 [Interproscan]. | 0.22 | OrthoFinder | |
| Dusal.0212s00010.1 | 33202584 | Nucleolar complex protein 2 [Interproscan]. | 0.05 | OrthoFinder | |
| EOD10592 | No alias | Hypothetical protein [Ensembl]. | 0.04 | OrthoFinder | |
| EOD42086 | No alias | Nucleolar complex protein 2 [Interproscan]. | 0.13 | OrthoFinder | |
| OT_08G01690.1 | No alias | Nucleolar complex protein 2 [Interproscan]. | 0.17 | OrthoFinder | |
| PTI_01G07130.1 | No alias | Nucleolar complex protein 2 [Interproscan]. | 0.26 | OrthoFinder | |
| Sro541_g163210.1 | Contig3996.g30686 | Nucleolar complex protein 2 homolog | 0.2 | OrthoFinder | |
| Transcript_contig_58525 | 58525 | Hypothetical protein | 0.01 | OrthoFinder | |
| XM_003058280.1 | MicpuC2_1538, 1538 | Nucleolar complex protein 2 [Interproscan]. | 0.08 | OrthoFinder | |
| lcl|LHPG02000004.1_cds_PRW59339.1_7057 | PRW59339 | Nucleolar complex 2 | 0.17 | OrthoFinder | |
| lcl|VRMN01000006.1_cds_KAA8493738.1_4500 | KAA8493738 | Nucleolar complex protein 2-like | 0.13 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003724 | RNA helicase activity | IEP | Enrichment |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016426 | tRNA (adenine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| BP | GO:0030488 | tRNA methylation | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005343 | Noc2 | 489 | 795 |
| No external refs found! |