Cre09.g390319 (30780357)


Aliases : 30780357

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor


Gene families : OG_01_0000548 (OrthoFinder) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g390319
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.27 tig00000241_g20884.t1 ARF guanine-nucleotide exchange factor GNL2... 0.03 OrthoFinder
Cpa|evm.model.tig00000852.23 tig00000852_g5036.t1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder
Cz01g11170.t1 No alias Mon2, dimerisation and cyclophilin-binding domain; Sec7,... 0.06 OrthoFinder
Cz06g02180.t1 No alias Sec7 domain; Mon2, C-terminal; Sec7, C-terminal; Mon2,... 0.05 OrthoFinder
Dusal.0265s00014.1 33188548 Sec7 domain [Interproscan]. 0.04 OrthoFinder
EOD15754 No alias BIG1, ArfGEF of the BIG/SEC7 subfamily [Ensembl]. 0.02 OrthoFinder
OT_04G04310.1 No alias Mon2, C-terminal; Mon2, dimerisation and... 0.04 OrthoFinder
OT_17G00380.1 No alias Guanine nucleotide exchange factor, N-terminal; Sec7... 0.02 OrthoFinder
Sro63_g035620.1 Contig2778.g22327 Inhibited guanine nucleotide-exchange protein 1 0.05 OrthoFinder
TP07G03810.1 No alias Sec7 domain; Sec7, C-terminal; Guanine nucleotide... 0.01 OrthoFinder
Transcript_contig_56507 56507 Mon2, dimerisation and cyclophilin-binding domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_90466 90466 Sec7, C-terminal; Sec7 domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000671.1_cds_GFH13961.1_8438 HaLaN_09930, GFH13961 Brefeldin A-inhibited guanine nucleotide-exchange 2-like 0.02 OrthoFinder
lcl|BLLF01000671.1_cds_GFH13962.1_8439 HaLaN_09931, GFH13962 SEC7 domain-containing protein 0.02 OrthoFinder
lcl|BLLF01002712.1_cds_GFH25080.1_19557 HaLaN_22986, GFH25080 SEC7 domain-containing protein 0.01 OrthoFinder
lcl|BLLF01002712.1_cds_GFH25081.1_19558 HaLaN_22987, GFH25081 Brefeldin A-inhibited guanine nucleotide-exchange 2-like 0.02 OrthoFinder
lcl|BLLF01004130.1_cds_GFH28986.1_23463 HaLaN_27567, GFH28986 Brefeldin a-inhibited guanine nucleotide-exchange protein 2-like 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494452.1_2982 KAA8494452 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494825.1_3355 KAA8494825 ARF guanine-nucleotide exchange factor GNL1 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
CC GO:0030906 retromer, cargo-selective complex IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR032691 Sec7_N 550 725
IPR015403 Sec7_C 1490 1572
IPR000904 Sec7_dom 869 1050
IPR032629 DCB_dom 207 362
No external refs found!