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Aliases : 30780648
No description available
Gene families : OG_01_0000025 (OrthoFinder) Phylogenetic Tree(s): OG0000025_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre09.g389541 | |
| Cluster | HCCA: Cluster_15 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000385.16 | tig00000385_g24743.t1 | No description available | 0.01 | OrthoFinder | |
| Cz11g12050.t1 | No alias | RAP domain [Interproscan]. | 0.02 | OrthoFinder | |
| Cz11g18250.t1 | No alias | RAP domain [Interproscan]. | 0.02 | OrthoFinder | |
| Cz19g00130.t1 | No alias | RAP domain [Interproscan]. | 0.03 | OrthoFinder | |
| Cz19g01260.t1 | No alias | RAP domain [Interproscan]. | 0.01 | OrthoFinder | |
| Cz19g01270.t1 | No alias | FAST kinase leucine-rich [Interproscan]. | 0.01 | OrthoFinder | |
| Cz19g02050.t1 | No alias | RAP domain [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0125s00023.1 | 33191811 | RAP domain [Interproscan]. | 0.02 | OrthoFinder | |
| EOD14606 | No alias | RAP domain [Interproscan]. | 0.01 | OrthoFinder | |
| OT_05G03350.1 | No alias | RAP domain [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_18G02520.1 | No alias | RAP domain [Interproscan]. | 0.03 | OrthoFinder | |
| Transcript_contig_57634 | 57634 | Hypothetical protein | 0.02 | OrthoFinder | |
| Vocar.0020s0115.1 | 32886784 | RAP domain [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0026s0142.1 | 32892500 | RAP domain [Interproscan]. | 0.05 | OrthoFinder | |
| XM_002501352.1 | MICPUN_100065, 100065 | RAP domain [Interproscan]. | 0.05 | OrthoFinder | |
| XM_002502091.1 | MICPUN_100534, 100534 | RAP domain [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003057346.1 | MicpuC2_46785, 46785 | RAP domain [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01005907.1_cds_GFH31753.1_26230 | HaLaN_30858, GFH31753 | RAP domain-domain-containing protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Enrichment |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013584 | RAP | 1176 | 1232 |
| No external refs found! |