Aliases : 30773925
Description : 5-3 exoribonuclease 2 OS=Arabidopsis thaliana
Gene families : OG_01_0000264 (OrthoFinder) Phylogenetic Tree(s): OG0000264_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre08.g373916 | |
Cluster | HCCA: Cluster_76 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PTI_01G08170.1 | No alias | 5'-3' exoribonuclease 1, SH3-like domain; Xrn1, helical... | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0004527 | exonuclease activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | Enrichment |
MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
MF | GO:0003690 | double-stranded DNA binding | IEP | Enrichment |
MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | Enrichment |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Enrichment |
BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
BP | GO:0006281 | DNA repair | IEP | Enrichment |
BP | GO:0006284 | base-excision repair | IEP | Enrichment |
BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
BP | GO:0006298 | mismatch repair | IEP | Enrichment |
BP | GO:0006950 | response to stress | IEP | Enrichment |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Enrichment |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Enrichment |
MF | GO:0030983 | mismatched DNA binding | IEP | Enrichment |
BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
BP | GO:0050896 | response to stimulus | IEP | Enrichment |
BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
No external refs found! |