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  5. Cpa|evm.model.tig00000403.48

Cpa|evm.model.tig00000403.48 (tig00000403_g305.t1)


Aliases : tig00000403_g305.t1

Description : Ethylene response sensor 1 OS=Arabidopsis thaliana


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000403.48
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.03 OrthoFinder
Cpa|evm.model.tig00000157.108 tig00000157_g9707.t1 Ethylene receptor 1 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00000190.40 tig00000190_g13861.t1 Ethylene receptor OS=Nicotiana tabacum 0.08 OrthoFinder
Cpa|evm.model.tig00000640.11 tig00000640_g2766.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.05 OrthoFinder
Cpa|evm.model.tig00000792.33 tig00000792_g4184.t1 Probable histidine kinase 6 OS=Oryza sativa subsp. japonica 0.05 OrthoFinder
Cpa|evm.model.tig00001224.9 tig00001224_g7632.t1 Histidine kinase 5 OS=Arabidopsis thaliana 0.05 OrthoFinder
Cpa|evm.model.tig00020660.47 tig00020660_g12551.t1 UDP-xylose transporter 1 OS=Arabidopsis thaliana 0.06 OrthoFinder
Cpa|evm.model.tig00020943.57 tig00020943_g16300.t1 Ethylene receptor OS=Malus domestica 0.05 OrthoFinder
Cpa|evm.model.tig00021137.20 tig00021137_g18985.t1 Ethylene receptor 1 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00021179.53 tig00021179_g19270.t1 Probable histidine kinase 5 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder
Cpa|evm.model.tig00021464.23 tig00021464_g21729.t1 Histidine kinase 3 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cre16.g678900 30778058 No description available 0.01 OrthoFinder
Dusal.0198s00010.1 33192678 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Dusal.0212s00008.1 33202594 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
EOD13570 No alias Putative PAS domain sensor hybrid histidine kinase [Ensembl]. 0.01 OrthoFinder
PTI_22G00210.1 No alias PAS fold-4; Signal transduction histidine kinase,... 0.02 OrthoFinder
Vocar.0001s0831.1 32884659 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.01 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12981.1_7458 HaLaN_08775, GFH12981 Signal transduction histidine kinase,... 0.02 OrthoFinder
lcl|BLLF01000625.1_cds_GFH13551.1_8028 HaLaN_09455, GFH13551 Signal transduction histidine kinase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000407 GDA1_CD39_NTPase 1463 1742
IPR003018 GAF 490 639
IPR003661 HisK_dim/P 912 975
IPR001789 Sig_transdc_resp-reg_receiver 1335 1427
IPR003594 HATPase_C 1025 1133
No external refs found!