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  5. Cre08.g372250

Cre08.g372250 (30774146)


Aliases : 30774146

Description : ABC transporter F family member 5 OS=Arabidopsis thaliana


Gene families : OG_01_0000347 (OrthoFinder) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g372250
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cz05g07140.t1 No alias ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Cz05g11180.t1 No alias ABC-transporter extension domain; ABC transporter-like... 0.08 OrthoFinder
EOD05643 No alias ABC transporter-like [Interproscan]. 0.01 OrthoFinder
OT_03G01660.1 No alias ABC-transporter extension domain; ABC transporter-like... 0.03 OrthoFinder
OT_04G00900.1 No alias ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
Sro188_g081270.1 Contig1383.g12728 ATP-binding protein ChvD (Fragment) 0.03 OrthoFinder
SymbC1.scaffold17418.2 17418.2 ABC transporter-like; Signal transduction response... 0.01 OrthoFinder
SymbC1.scaffold4.1435 4.1435 ABC transporter-like; NYN domain, limkain-b1-type;... 0.01 OrthoFinder
TP04G09160.1 No alias ABC transporter-like; ABC-transporter extension domain... 0.02 OrthoFinder
Transcript_contig_78423 78423 ABC transporter-like [Interproscan]. 0.03 OrthoFinder
Vocar.0065s0003.1 32886855 ABC-transporter extension domain; ABC transporter-like... 0.04 OrthoFinder
XM_002499700.1 MICPUN_78779, 78779 ATP-binding cassette superfamily 0.08 OrthoFinder
XM_002508755.1 MICPUN_106164, 106164 ATP-binding cassette superfamily 0.03 OrthoFinder
XM_003058038.1 MicpuC2_32930, 32930 ATP-binding cassette superfamily 0.01 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33209.1_3648 PRW33209 ABC transporter F family member 5 0.03 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497333.1_1062 KAA8497333 ABC transporter F family member 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR032781 ABC_tran_Xtn 347 432
IPR003439 ABC_transporter-like_ATP-bd 461 592
IPR003439 ABC_transporter-like_ATP-bd 133 308
No external refs found!