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  5. Cre08.g367400

Cre08.g367400 (30773729, LHCSR3)


Aliases : 30773729, LHCSR3

Description : Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LhcSR-dependent machinery.LhcSR protein


Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g367400
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
EOD25905 No alias Light harvesting protein [Ensembl]. 0.01 OrthoFinder
PTI_05G00320.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
PTI_14G03460.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
Sro2423_g327210.1 Contig3569.g27581 Chloroplastic 0.02 OrthoFinder
TP01G11130.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001602.1_cds_GFH20248.1_14725 HaLaN_17338, GFH20248 Chlorophyll a-b binding protein, chloroplastic 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498850.1_7803 KAA8498850 Chlorophyll a-b binding protein, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 53 215
No external refs found!