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  5. Cre07.g353950

Cre07.g353950 (30774882)


Aliases : 30774882

Description : DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).exonuclease (EXO1)


Gene families : OG_01_0001384 (OrthoFinder) Phylogenetic Tree(s): OG0001384_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g353950
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000403.40 tig00000403_g297.t1 DNA damage response.DNA repair mechanisms.homologous... 0.03 OrthoFinder
EOD22306 No alias XPG-I domain; XPG N-terminal [Interproscan]. 0.01 OrthoFinder
OT_01G04780.1 No alias XPG N-terminal; XPG-I domain [Interproscan]. 0.04 OrthoFinder
OT_02G01010.1 No alias XPG N-terminal [Interproscan]. 0.02 OrthoFinder
PTI_16G02300.1 No alias XPG N-terminal; XPG-I domain [Interproscan]. 0.01 OrthoFinder
Sro70_g039040.1 Contig3352.g26251 Exonuclease 1 0.01 OrthoFinder
XM_002503548.1 MICPUN_69661, 69661 XPG N-terminal; XPG-I domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006086 XPG-I_dom 139 226
IPR006085 XPG_DNA_repair_N 1 98
No external refs found!