Cre07.g352650 (30775322)


Aliases : 30775322

No description available


Gene families : OG_01_0000163 (OrthoFinder) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g352650
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021464.4 tig00021464_g21711.t1 No description available 0.03 OrthoFinder
Cz03g21120.t1 No alias RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
Cz04g00020.t1 No alias RNA recognition motif domain [Interproscan]. 0.04 OrthoFinder
Dusal.0173s00022.1 33191835 Hypothetical protein 0.02 OrthoFinder
Dusal.0647s00003.1 33194461 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Dusal.0862s00006.1 33191519 Hypothetical protein 0.02 OrthoFinder
PTI_05G02080.1 No alias RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
Sro4_g003060.1 Contig3815.g29224 Splicing factor U2af large subunit 0.01 OrthoFinder
Transcript_contig_55128 55128 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_55294 55294 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56236 56236 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
UNPLg00511.t1 No alias Hypothetical protein 0.02 OrthoFinder
UNPLg00683.t1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Vocar.0012s0273.1 32895004 RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
Vocar.0044s0038.1 32896597 RNA recognition motif domain [Interproscan]. 0.04 OrthoFinder
XM_002500423.1 MICPUN_56849, 56849 RNA binding protein 0.03 OrthoFinder
XM_002506777.1 MICPUN_89118, 89118 RNA recognition motif domain [Interproscan]. 0.04 OrthoFinder
XM_003063178.1 MicpuC2_7420, 7420 Chorismate pyruvate-lyase Rv2949c-like [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000063.1_cds_GFH06919.1_1396 HaLaN_01639, GFH06919 U2 snRNP auxiliary factor large subunit 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!