Cre07.g350500 (30774357)

Aliases : 30774357

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase

Gene families : OG_01_0000866 (OrthoFinder) Phylogenetic Tree(s): OG0000866_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre07.g350500
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000402.37	tig00000402_g214.t1	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder
Cpa\|evm.model.tig00001130.5	tig00001130_g7234.t1	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.01	OrthoFinder
Cz05g20150.t1	No alias	Glutathione S-transferase, C-terminal; Aminoacyl-tRNA...	0.04	OrthoFinder
Cz06g08200.t1	No alias	Aminoacyl-tRNA synthetase, class Ia; Valyl-tRNA...	0.04	OrthoFinder
Dusal.0452s00014.1	33191422	Aminoacyl-tRNA synthetase, class Ia [Interproscan].	0.01	OrthoFinder
EOD17893	No alias	Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,...	0.03	OrthoFinder
EOD28592	No alias	Putative valyl-tRNA synthetase [Ensembl].	0.01	OrthoFinder
OT_03G02900.1	No alias	Aminoacyl-tRNA synthetase, class Ia;...	0.05	OrthoFinder
OT_08G03790.1	No alias	Aminoacyl-tRNA synthetase, class Ia;...	0.07	OrthoFinder
PTI_13G01280.1	No alias	Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,...	0.01	OrthoFinder
Sro408_g136830.1	Contig3193.g25218	Valine--tRNA ligase (Fragment)	0.03	OrthoFinder
Sro427_g140590.1	Contig2653.g21430	Valine--tRNA ligase	0.09	OrthoFinder
SymbC1.scaffold25.80	25.80	Protein-L-isoaspartate(D-aspartate) O-methyltransferase...	0.01	OrthoFinder
TP20G01590.1	No alias	Aminoacyl-tRNA synthetase, class Ia;...	0.04	OrthoFinder
Transcript_contig_89410	89410	Aminoacyl-tRNA synthetase, class Ia; Glutathione...	0.05	OrthoFinder
Vocar.0023s0186.1	32883240	Aminoacyl-tRNA synthetase, class Ia; Valyl-tRNA...	0.1	OrthoFinder
XM_002501649.1	MICPUN_96323, 96323	Valyl-tRNA synthetase, tRNA-binding arm; Aminoacyl-tRNA...	0.02	OrthoFinder
XM_002508255.1	MICPUN_84188, 84188	Valyl-tRNA synthetase, tRNA-binding arm; Aminoacyl-tRNA...	0.08	OrthoFinder
XM_003058944.1	MicpuC2_47388, 47388	Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,...	0.03	OrthoFinder
XM_003062580.1	MicpuC2_45875, 45875	Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,...	0.02	OrthoFinder
lcl\|BLLF01000476.1_cds_GFH12175.1_6652	HaLaN_07812, GFH12175	Aminoacyl-tRNA synthetase, class Ia [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000008.1_cds_PRW56769.1_9481	PRW56769	Valine-tRNA ligase isoform A	0.04	OrthoFinder
lcl\|LHPG02000018.1_cds_PRW33017.1_3695	PRW33017	Valyl-tRNA synthetase	0.03	OrthoFinder
lcl\|VRMN01000003.1_cds_KAA8495921.1_1919	KAA8495921	Valine--tRNA ligase, chloroplastic/mitochondrial 2	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0004832	valine-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006438	valyl-tRNA aminoacylation	IEA	Interproscan
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Enrichment
BP	GO:0000105	histidine biosynthetic process	IEP	Enrichment
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0003747	translation release factor activity	IEP	Enrichment
MF	GO:0003879	ATP phosphoribosyltransferase activity	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004813	alanine-tRNA ligase activity	IEP	Enrichment
MF	GO:0004820	glycine-tRNA ligase activity	IEP	Enrichment
MF	GO:0004827	proline-tRNA ligase activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
BP	GO:0006413	translational initiation	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
BP	GO:0006415	translational termination	IEP	Enrichment
BP	GO:0006419	alanyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006426	glycyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006547	histidine metabolic process	IEP	Enrichment
BP	GO:0006720	isoprenoid metabolic process	IEP	Enrichment
BP	GO:0006721	terpenoid metabolic process	IEP	Enrichment
MF	GO:0008079	translation termination factor activity	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Enrichment
BP	GO:0009058	biosynthetic process	IEP	Enrichment
BP	GO:0009059	macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0016043	cellular component organization	IEP	Enrichment
BP	GO:0016114	terpenoid biosynthetic process	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Enrichment
MF	GO:0016763	pentosyltransferase activity	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Enrichment
BP	GO:0017038	protein import	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
BP	GO:0022411	cellular component disassembly	IEP	Enrichment
MF	GO:0031072	heat shock protein binding	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
BP	GO:0032984	protein-containing complex disassembly	IEP	Enrichment
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0043624	cellular protein complex disassembly	IEP	Enrichment
BP	GO:0043933	protein-containing complex subunit organization	IEP	Enrichment
BP	GO:0044249	cellular biosynthetic process	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
MF	GO:0046429	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	IEP	Enrichment
MF	GO:0052592	oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor	IEP	Enrichment
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Enrichment
BP	GO:0071840	cellular component organization or biogenesis	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
BP	GO:1901576	organic substance biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002300	aa-tRNA-synth_Ia	64	632
IPR019499	Val-tRNA_synth_tRNA-bd	901	964
IPR013155	M/V/L/I-tRNA-synth_anticd-bd	686	828

External Links

No external refs found!

Cre07.g350500 (30774357)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation