Cpa|evm.model.tig00000402.37 (tig00000402_g214.t1)


Aliases : tig00000402_g214.t1

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase


Gene families : OG_01_0000866 (OrthoFinder) Phylogenetic Tree(s): OG0000866_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000402.37
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cre07.g350500 30774357 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder
EOD05767 No alias Putative valyl-tRNA synthetase [Ensembl]. 0.01 OrthoFinder
EOD17893 No alias Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.01 OrthoFinder
OT_03G02900.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.01 OrthoFinder
Sro408_g136830.1 Contig3193.g25218 Valine--tRNA ligase (Fragment) 0.02 OrthoFinder
Sro427_g140590.1 Contig2653.g21430 Valine--tRNA ligase 0.02 OrthoFinder
TP18G02600.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.02 OrthoFinder
TP20G01590.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.04 OrthoFinder
Vocar.0023s0186.1 32883240 Aminoacyl-tRNA synthetase, class Ia; Valyl-tRNA... 0.03 OrthoFinder
XM_002501649.1 MICPUN_96323, 96323 Valyl-tRNA synthetase, tRNA-binding arm; Aminoacyl-tRNA... 0.02 OrthoFinder
XM_002508255.1 MICPUN_84188, 84188 Valyl-tRNA synthetase, tRNA-binding arm; Aminoacyl-tRNA... 0.01 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56769.1_9481 PRW56769 Valine-tRNA ligase isoform A 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW33017.1_3695 PRW33017 Valyl-tRNA synthetase 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495921.1_1919 KAA8495921 Valine--tRNA ligase, chloroplastic/mitochondrial 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0004832 valine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
BP GO:0006438 valyl-tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR019499 Val-tRNA_synth_tRNA-bd 756 820
IPR002300 aa-tRNA-synth_Ia 1 262
IPR002300 aa-tRNA-synth_Ia 265 500
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 557 688
No external refs found!