1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre07.g336200

Cre07.g336200 (30774569)


Aliases : 30774569

Description : Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana


Gene families : OG_01_0000492 (OrthoFinder) Phylogenetic Tree(s): OG0000492_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g336200
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000217.46 tig00000217_g19176.t1 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00021350.30 tig00021350_g20646.t1 Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder
Cpa|evm.model.tig00021502.2 tig00021502_g22052.t1 Protein degradation.peptidase families.cysteine-type... 0.05 OrthoFinder
Cz04g08070.t1 No alias Ubiquitin-like domain; Peptidase C19, ubiquitin... 0.03 OrthoFinder
Cz07g24170.t1 No alias Ubiquitin carboxyl-terminal hydrolase, C-terminal;... 0.02 OrthoFinder
Dusal.0097s00017.1 33203700 Ubiquitin carboxyl-terminal hydrolase, C-terminal;... 0.02 OrthoFinder
Dusal.0436s00003.1 33203572 Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.03 OrthoFinder
EOD25802 No alias Ubiquitin carboxyl-terminal hydrolase [Ensembl]. 0.02 OrthoFinder
EOD33970 No alias MATH/TRAF domain; Ubiquitin carboxyl-terminal hydrolase... 0.04 OrthoFinder
OT_02G02970.1 No alias Ubiquitin carboxyl-terminal hydrolase, C-terminal;... 0.02 OrthoFinder
PTI_09G04030.1 No alias Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.02 OrthoFinder
Transcript_contig_54363 54363 MATH/TRAF domain; Peptidase C19, ubiquitin... 0.02 OrthoFinder
Transcript_contig_90319 90319 Hypothetical protein 0.02 OrthoFinder
Vocar.0047s0064.1 32899302 Ubiquitin carboxyl-terminal hydrolase, C-terminal;... 0.02 OrthoFinder
XM_002504315.1 MICPUN_61497, 61497 MATH/TRAF domain; RING/Ubox like zinc-binding domain... 0.07 OrthoFinder
XM_002505814.1 MICPUN_87951, 87951 Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.04 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60998.1_245 PRW60998 Ubiquitin carboxyl-terminal hydrolase 12-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 188 510
IPR024729 USP7_ICP0-binding_dom 620 896
IPR029346 USP_C 910 969
IPR029346 USP_C 1058 1256
IPR002083 MATH/TRAF_dom 50 170
No external refs found!