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  5. Cre07.g332800

Cre07.g332800 (30774480)


Aliases : 30774480

No description available


Gene families : OG_01_0004103 (OrthoFinder) Phylogenetic Tree(s): OG0004103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g332800
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020544.6 tig00020544_g10486.t1 No description available 0.02 OrthoFinder
OT_07G04150.1 No alias Nrap protein, domain 6; Nrap protein domain 1; Nrap... 0.07 OrthoFinder
PTI_00G01040.1 No alias Nrap protein, domain 4; Nrap protein, domain 5; Nrap... 0.11 OrthoFinder
Sro679_g186040.1 Contig1031.g10253 Nucleolar protein 6 0.07 OrthoFinder
TP23G01320.1 No alias Nrap protein domain 1; Nrap protein, domain 2; Nrap... 0.06 OrthoFinder
Transcript_contig_2537 2537 Nrap protein, domain 2 [Interproscan]. 0.03 OrthoFinder
Transcript_contig_60896 60896 Nrap protein domain 1 [Interproscan]. 0.02 OrthoFinder
UNPLg00579.t1 No alias Nrap protein, domain 4; Nrap protein, domain 5; Nrap... 0.09 OrthoFinder
UNPLg00755.t1 No alias Nrap protein, domain 3; Nrap protein, domain 4; Nrap... 0.12 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56330.1_9914 PRW56330 Nucleolar 6 isoform X1 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR035368 Nrap_D3 625 773
IPR035369 Nrap_D4 804 956
IPR035082 Nrap_D1 213 371
IPR035367 Nrap_D2 382 570
IPR035370 Nrap_D5 1027 1166
IPR035371 Nrap_D6 1345 1450
No external refs found!