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  5. Cre07.g331500

Cre07.g331500 (30774567, CLPR3)


Aliases : 30774567, CLPR3

Description : Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g331500
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000411.30 tig00000411_g533.t1 ATP-dependent Clp protease proteolytic subunit 6,... 0.02 OrthoFinder
Cpa|evm.model.tig00000842.6 tig00000842_g4825.t1 ATP-dependent Clp protease proteolytic subunit... 0.02 OrthoFinder
Cpa|evm.model.tig00001420.2 tig00001420_g8689.t1 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder
Cz01g02300.t1 No alias Clp protease proteolytic subunit... 0.04 OrthoFinder
Cz12g19130.t1 No alias Clp protease proteolytic subunit... 0.05 OrthoFinder
Cz12g19140.t1 No alias Clp protease proteolytic subunit... 0.04 OrthoFinder
Cz19g05120.t1 No alias Clp protease proteolytic subunit... 0.04 OrthoFinder
Dusal.0070s00013.1 33189316 Clp protease proteolytic subunit... 0.03 OrthoFinder
OT_02G00390.1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
OT_02G01220.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
OT_02G02070.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
OT_05G01890.1 No alias Clp protease proteolytic subunit... 0.05 OrthoFinder
OT_09G02490.1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
Transcript_contig_56182 56182 Clp protease proteolytic subunit... 0.02 OrthoFinder
Transcript_contig_56330 56330 Clp protease proteolytic subunit... 0.02 OrthoFinder
Vocar.0011s0141.1 32895480 Clp protease proteolytic subunit... 0.03 OrthoFinder
Vocar.0016s0150.1 32898204 Clp protease proteolytic subunit... 0.02 OrthoFinder
Vocar.0018s0103.1 32898503 Clp protease proteolytic subunit... 0.03 OrthoFinder
Vocar.0034s0071.1 32893064 Clp protease proteolytic subunit... 0.02 OrthoFinder
XM_002502598.1 MICPUN_108326, 108326 Clp protease proteolytic subunit... 0.02 OrthoFinder
XM_003064166.1 MicpuC2_23295, 23295 Clp protease proteolytic subunit... 0.03 OrthoFinder
lcl|BLLF01000493.1_cds_GFH12345.1_6822 HaLaN_08009, GFH12345 ATP-dependent Clp protease proteolytic subunit 0.02 OrthoFinder
lcl|BLLF01002000.1_cds_GFH22257.1_16734 HaLaN_19692, GFH22257 ATP-dependent Clp protease proteolytic subunit 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61527.1_10 PRW61527 ATP-dependent Clp protease proteolytic subunit chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Enrichment
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0019107 myristoyltransferase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 54 235
No external refs found!