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  5. Cre07.g328400

Cre07.g328400 (30775106)


Aliases : 30775106

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF15 component


Gene families : OG_01_0000644 (OrthoFinder) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g328400
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.52 tig00000194_g14781.t1 RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder
Cz12g14160.t1 No alias RNA recognition motif domain; Zinc finger, RanBP2-type... 0.03 OrthoFinder
EOD21801 No alias Hypothetical protein [Ensembl]. 0.04 OrthoFinder
EOD27458 No alias Hypothetical protein [Ensembl]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 18 92
IPR001876 Znf_RanBP2 324 351
IPR001876 Znf_RanBP2 165 193
No external refs found!