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  5. Cre07.g322300

Cre07.g322300 (30775175)


Aliases : 30775175

Description : Regulator of telomere elongation helicase 1 homolog OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000361 (OrthoFinder) Phylogenetic Tree(s): OG0000361_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g322300
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Cz02g00030.t1 No alias ATP-dependent helicase, C-terminal; DEAD2 [Interproscan]. 0.03 OrthoFinder
Dusal.0184s00006.1 33197114 ATP-dependent helicase, C-terminal; DEAD2 [Interproscan]. 0.01 OrthoFinder
OT_04G00710.1 No alias ATP-dependent helicase, C-terminal; DNA polymerase... 0.06 OrthoFinder
OT_08G00240.1 No alias ATP-dependent helicase, C-terminal; DEAD2 [Interproscan]. 0.04 OrthoFinder
OT_16G01260.1 No alias ATP-dependent helicase, C-terminal; DEAD2 [Interproscan]. 0.02 OrthoFinder
Sro1149_g246570.1 Contig1585.g14401 Regulator of telomere elongation helicase 1 0.03 OrthoFinder
Sro13_g010240.1 Contig337.g4565 Helicase CHL1 0.01 OrthoFinder
XM_003063818.1 MicpuC2_4429, 4429 ATP-dependent helicase, C-terminal [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003678 DNA helicase activity IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006497 protein lipidation IEP Enrichment
BP GO:0006505 GPI anchor metabolic process IEP Enrichment
BP GO:0006506 GPI anchor biosynthetic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006555 ATP-dep_Helicase_C 849 1107
IPR010614 DEAD_2 246 412
No external refs found!