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  5. Cre07.g315400

Cre07.g315400 (30774434)


Aliases : 30774434

Description : GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000812 (OrthoFinder) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g315400
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022080.6 tig00022080_g23790.t1 NO-associated protein 1, chloroplastic/mitochondrial... 0.03 OrthoFinder
EOD41710 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
OT_04G02650.1 No alias GTP binding domain [Interproscan]. 0.02 OrthoFinder
OT_06G03500.1 No alias GTP binding domain [Interproscan]. 0.04 OrthoFinder
Sro453_g146070.1 Contig1693.g15164 Nitric oxide 0.04 OrthoFinder
TP03G05240.1 No alias Hypothetical protein 0.01 OrthoFinder
Vocar.0008s0291.1 32897303 GTP binding domain [Interproscan]. 0.03 OrthoFinder
XM_002501467.1 MICPUN_58144, 58144 GTPase 0.1 OrthoFinder
XM_002507834.1 MICPUN_84071, 84071 GTP binding domain [Interproscan]. 0.01 OrthoFinder
XM_003057944.1 MicpuC2_8887, 8887 Hypothetical protein 0.02 OrthoFinder
XM_003062118.1 MicpuC2_28932, 28932 GTP binding domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01001043.1_cds_GFH16733.1_11210 HaLaN_13216, GFH16733 G domain-containing protein 0.04 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32832.1_3690 PRW32832 IMP dehydrogenase GMP reductase 0.06 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499207.1_8160 KAA8499207 Protein YqeH 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 406 474
No external refs found!