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  5. Cre07.g314550

Cre07.g314550 (30774281)


Aliases : 30774281

Description : RNA processing.RNA modification.rRNA/tRNA methylation.TRM8-TRM82 tRNA guanosine-methyltransferase complex.TRM8 component


Gene families : OG_01_0003381 (OrthoFinder) Phylogenetic Tree(s): OG0003381_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g314550
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cz01g17030.t1 No alias tRNA (guanine-N-7) methyltransferase, Trmb type [Interproscan]. 0.03 OrthoFinder
PTI_11G01260.1 No alias tRNA (guanine-N-7) methyltransferase, Trmb type [Interproscan]. 0.02 OrthoFinder
TP06G03070.1 No alias tRNA (guanine-N-7) methyltransferase, Trmb type [Interproscan]. 0.02 OrthoFinder
Vocar.0003s0082.1 32889200 tRNA (guanine-N-7) methyltransferase, Trmb type [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006400 tRNA modification IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR003358 tRNA_(Gua-N-7)_MeTrfase_Trmb 105 280
No external refs found!