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  5. Cre07.g314100

Cre07.g314100 (30774816)


Aliases : 30774816

No description available


Gene families : OG_01_0002737 (OrthoFinder) Phylogenetic Tree(s): OG0002737_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g314100
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021721.13 tig00021721_g23212.t1 No description available 0.02 OrthoFinder
Cz01g27160.t1 No alias Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.02 OrthoFinder
EOD08947 No alias Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.01 OrthoFinder
EOD36382 No alias Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.05 OrthoFinder
OT_05G05050.1 No alias Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.21 OrthoFinder
PTI_04G01660.1 No alias Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.19 OrthoFinder
TP14G02420.1 No alias Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.12 OrthoFinder
Transcript_contig_78583 78583 Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.05 OrthoFinder
Vocar.0003s0079.1 32888998 Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.03 OrthoFinder
XM_002508792.1 MICPUN_69792, 69792 Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.13 OrthoFinder
XM_003059468.1 MicpuC2_11268, 11268 Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.11 OrthoFinder
lcl|BLLF01000163.1_cds_GFH08468.1_2945 HaLaN_03438, GFH08468 Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493741.1_4503 KAA8493741 Ribosomal L1 domain-containing protein 1 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 38 257
No external refs found!