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  5. Cre06.g299650

Cre06.g299650 (30779921, CLPR6)


Aliases : 30779921, CLPR6

Description : ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g299650
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000411.30 tig00000411_g533.t1 ATP-dependent Clp protease proteolytic subunit 6,... 0.02 OrthoFinder
Cpa|evm.model.tig00000842.6 tig00000842_g4825.t1 ATP-dependent Clp protease proteolytic subunit... 0.03 OrthoFinder
Cpa|evm.model.tig00020553.201 tig00020553_g10691.t1 ATP-dependent Clp protease proteolytic subunit 4,... 0.03 OrthoFinder
Cpa|evm.model.tig00020563.155 tig00020563_g11357.t1 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder
Cpa|evm.model.tig00021522.2 tig00021522_g22096.t1 ATP-dependent Clp protease proteolytic subunit 5,... 0.02 OrthoFinder
Cz01g02300.t1 No alias Clp protease proteolytic subunit... 0.04 OrthoFinder
Cz12g19130.t1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
Cz19g05120.t1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
Dusal.0179s00012.1 33190120 Clp protease proteolytic subunit... 0.03 OrthoFinder
OT_02G00390.1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
OT_05G01890.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
OT_17G01480.1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
Transcript_contig_56330 56330 Clp protease proteolytic subunit... 0.02 OrthoFinder
Vocar.0004s0241.1 32890012 Clp protease proteolytic subunit... 0.02 OrthoFinder
Vocar.0006s0234.1 32894393 Clp protease proteolytic subunit... 0.03 OrthoFinder
Vocar.0011s0141.1 32895480 Clp protease proteolytic subunit... 0.02 OrthoFinder
Vocar.0016s0150.1 32898204 Clp protease proteolytic subunit... 0.04 OrthoFinder
Vocar.0018s0103.1 32898503 Clp protease proteolytic subunit... 0.03 OrthoFinder
Vocar.0034s0071.1 32893064 Clp protease proteolytic subunit... 0.02 OrthoFinder
XM_003054761.1 MicpuC2_12936, 12936 Clp protease proteolytic subunit... 0.03 OrthoFinder
lcl|BLLF01001574.1_cds_GFH20100.1_14577 HaLaN_17169, GFH20100 ATP-dependent Clp protease proteolytic subunit 0.02 OrthoFinder
lcl|BLLF01002000.1_cds_GFH22257.1_16734 HaLaN_19692, GFH22257 ATP-dependent Clp protease proteolytic subunit 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44960.1_1979 PRW44960 Protease complex subunit 3 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006544 glycine metabolic process IEP Enrichment
BP GO:0006546 glycine catabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009071 serine family amino acid catabolic process IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 74 248
No external refs found!