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  5. Cre06.g299000

Cre06.g299000 (30778575, PRPL21)


Aliases : 30778575, PRPL21

Description : 50S ribosomal protein L21, chloroplastic OS=Staurastrum punctulatum


Gene families : OG_01_0001206 (OrthoFinder) Phylogenetic Tree(s): OG0001206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g299000
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001371.5 tig00001371_g8421.t1 50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre09.g388550 30780235, MRPL21 No description available 0.07 OrthoFinder
Cz10g19180.t1 No alias Ribosomal protein L21-like [Interproscan]. 0.3 OrthoFinder
Cz10g19190.t1 No alias Hypothetical protein 0.3 OrthoFinder
Dusal.0098s00017.1 33203615 Ribosomal protein L21-like [Interproscan]. 0.06 OrthoFinder
OT_01G04440.1 No alias Ribosomal protein L21-like [Interproscan]. 0.02 OrthoFinder
OT_07G01800.1 No alias Ribosomal protein L21-like [Interproscan]. 0.21 OrthoFinder
Sro1170_g248760.1 Contig3531.g27305 Protein L21 0.1 OrthoFinder
Sro51_chlor_g029900.1 Rpl21 Rpl21 0.1 OrthoFinder
SymbC1.scaffold10924.1 10924.1 Ribosomal protein L21-like [Interproscan]. 0.02 OrthoFinder
TPCG01970.1 No alias Ribosomal protein L21-like [Interproscan]. 0.09 OrthoFinder
TPCG03020.1 No alias Ribosomal protein L21-like [Interproscan]. 0.09 OrthoFinder
Vocar.0001s0246.1 32884851 Ribosomal protein L21-like [Interproscan]. 0.16 OrthoFinder
XM_002500115.1 MICPUN_89975, 89975 Ribosomal protein L21 0.25 OrthoFinder
XM_003058097.1 MicpuC2_47061, 47061 Ribosomal protein L21-like [Interproscan]. 0.09 OrthoFinder
XM_003062473.1 MicpuC2_51973, 51973 Ribosomal L21 protein, chloroplast precursor 0.03 OrthoFinder
lcl|BLLF01004819.1_cds_GFH30299.1_24776 HaLaN_29126, GFH30299 Plastid/chloroplast ribosomal protein L21 0.05 OrthoFinder
lcl|BLLF01006389.1_cds_GFH32203.1_26680 HaLaN_31385, GFH32203 Plastid/chloroplast ribosomal protein L21 0.07 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61049.1_51 PRW61049 50S ribosomal L21 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR028909 L21p-like 78 177
No external refs found!