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  5. Cre06.g298300

Cre06.g298300 (30778826)


Aliases : 30778826

Description : Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0006323 (OrthoFinder) Phylogenetic Tree(s): OG0006323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g298300
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cz08g09070.t1 No alias Repeat of unknown function XGLTT;... 0.03 OrthoFinder
Dusal.0217s00008.1 33197554 Pentatricopeptide repeat [Interproscan]. 0.04 OrthoFinder
XM_002500396.1 MICPUN_79939, 79939 Pentatricopeptide repeat; Pentacotripeptide-repeat... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
InterPro domains Description Start Stop
IPR033443 PPR_long 270 446
IPR002885 Pentatricopeptide_repeat 475 533
IPR002885 Pentatricopeptide_repeat 544 589
No external refs found!