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  5. Cre06.g297016

Cre06.g297016 (30778518)


Aliases : 30778518

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.SSL2/XPB-type subunit


Gene families : OG_01_0002469 (OrthoFinder) Phylogenetic Tree(s): OG0002469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g297016
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Cz08g25240.t1 No alias Helicase/UvrB, N-terminal; Helicase XPB/Ssl2, N-terminal... 0.01 OrthoFinder
OT_03G04280.1 No alias Helicase XPB/Ssl2, N-terminal domain; Helicase/UvrB,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006935 Helicase/UvrB_N 838 995
IPR032830 XPB/Ssl2_N 573 695
IPR032438 ERCC3_RAD25_C 1021 1266
No external refs found!