- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : tig00000391_g24858.t2
Description : Endoribonuclease YBEY, chloroplastic OS=Arabidopsis thaliana
Gene families : OG_01_0000553 (OrthoFinder) Phylogenetic Tree(s): OG0000553_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000391.26 | |
| Cluster | HCCA: Cluster_128 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre09.g402997 | 30780703 | Endoribonuclease YBEY, chloroplastic OS=Arabidopsis thaliana | 0.01 | OrthoFinder | |
| Transcript_contig_57326 | 57326 | Endoribonuclease YbeY [Interproscan]. | 0.01 | OrthoFinder | |
| XM_003061444.1 | MicpuC2_48274, 48274 | haloacid dehalogenase-like hydrolase; Endoribonuclease... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001514 | selenocysteine incorporation | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Enrichment |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006013 | mannose metabolic process | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006414 | translational elongation | IEP | Enrichment |
| BP | GO:0006417 | regulation of translation | IEP | Enrichment |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0006451 | translational readthrough | IEP | Enrichment |
| MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0009916 | alternative oxidase activity | IEP | Enrichment |
| BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | Enrichment |
| MF | GO:0015923 | mannosidase activity | IEP | Enrichment |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | Enrichment |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0017025 | TBP-class protein binding | IEP | Enrichment |
| BP | GO:0019318 | hexose metabolic process | IEP | Enrichment |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Enrichment |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | Enrichment |
| No external refs found! |