Cpa|evm.model.tig00000391.26 (tig00000391_g24858.t2)


Aliases : tig00000391_g24858.t2

Description : Endoribonuclease YBEY, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000553 (OrthoFinder) Phylogenetic Tree(s): OG0000553_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000391.26
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Cre09.g402997 30780703 Endoribonuclease YBEY, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder
Transcript_contig_57326 57326 Endoribonuclease YbeY [Interproscan]. 0.01 OrthoFinder
XM_003061444.1 MicpuC2_48274, 48274 haloacid dehalogenase-like hydrolase; Endoribonuclease... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 512 589
IPR020683 Ankyrin_rpt-contain_dom 1281 1338
IPR020683 Ankyrin_rpt-contain_dom 801 876
No external refs found!