Cre06.g288750 (30780037, CBP20)


Aliases : 30780037, CBP20

No description available


Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g288750
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000402.16 tig00000402_g193.t1 RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder
Cpa|evm.model.tig00000823.31 tig00000823_g4557.t1 RNA processing.RNA splicing.U12-type-intron-specific... 0.02 OrthoFinder
Cpa|evm.model.tig00020553.146 tig00020553_g10637.t1 Serine/arginine-rich splicing factor SR45a... 0.04 OrthoFinder
Cpa|evm.model.tig00021043.13 tig00021043_g17622.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00021433.15 tig00021433_g21269.t1 No description available 0.07 OrthoFinder
Cz05g06060.t1 No alias RNA recognition motif domain [Interproscan]. 0.04 OrthoFinder
Cz06g14010.t1 No alias RNA recognition motif domain [Interproscan]. 0.04 OrthoFinder
Cz07g27210.t1 No alias RNA recognition motif domain; Cleavage stimulation... 0.02 OrthoFinder
Cz08g24230.t1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Cz14g08190.t1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Cz17g16110.t1 No alias RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
Dusal.0028s00033.1 33198481 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Dusal.0322s00004.1 33197814 RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
EOD23362 No alias RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
EOD31760 No alias RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
EOD42035 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
OT_04G03540.1 No alias RNA recognition motif domain; Zinc finger, CCCH-type... 0.02 OrthoFinder
OT_05G03560.1 No alias RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
PTI_06G03380.1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Sro12_g009400.1 Contig2293.g18960 Trans isomerase E 0.01 OrthoFinder
Sro1655_g289020.1 Contig2908.g23148 Stimulation factor subunit 2 tau variant 0.02 OrthoFinder
Vocar.0001s0026.1 32885509 RNA recognition motif domain [Interproscan]. 0.06 OrthoFinder
XM_002504161.1 MICPUN_76997, 76997 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
XM_003056785.1 MicpuC2_9129, 9129 RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 19 89
No external refs found!