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  5. Cre06.g282500

Cre06.g282500 (30779252, RPL23a)


Aliases : 30779252, RPL23a

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL23a component


Gene families : OG_01_0004081 (OrthoFinder) Phylogenetic Tree(s): OG0004081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g282500
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000037.39 tig00000037_g10108.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.27 OrthoFinder
Cz15g20240.t1 No alias Ribosomal protein L23/L25, N-terminal; Ribosomal protein... 0.31 OrthoFinder
Dusal.0705s00006.1 33186300 Ribosomal protein L23/L25, N-terminal; Ribosomal protein... 0.23 OrthoFinder
OT_08G04160.1 No alias Ribosomal protein L25/L23; Ribosomal protein L23/L25,... 0.15 OrthoFinder
PTI_08G02770.1 No alias Ribosomal protein L25/L23; Ribosomal protein L23/L25,... 0.23 OrthoFinder
Sro521_g159410.1 Contig1979.g16931 60S ribosomal protein L23A 0.41 OrthoFinder
TP06G05220.1 No alias Ribosomal protein L23/L25, N-terminal; Ribosomal protein... 0.38 OrthoFinder
Vocar.0002s0021.1 32890790 Ribosomal protein L25/L23; Ribosomal protein L23/L25,... 0.25 OrthoFinder
XM_002507915.1 MICPUN_91476, 91476 Ribosomal protein L23/L25, N-terminal; Ribosomal protein... 0.34 OrthoFinder
XM_003058530.1 MicpuC2_33613, 33613 Ribosomal protein L25/L23; Ribosomal protein L23/L25,... 0.16 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34016.1_3146 PRW34016 60S ribosomal L23A 0.04 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496143.1_2141 KAA8496143 60S ribosomal protein L23a 0.13 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005633 Ribosomal_L23/L25_N 9 57
IPR013025 Ribosomal_L25/23 67 126
No external refs found!