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  5. Cre06.g282200

Cre06.g282200 (30780163, VPS32)


Aliases : 30780163, VPS32

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS32/SNF7 component


Gene families : OG_01_0001009 (OrthoFinder) Phylogenetic Tree(s): OG0001009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g282200
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cz15g09150.t1 No alias Snf7 family [Interproscan]. 0.03 OrthoFinder
Dusal.0095s00005.1 33190274 Snf7 family [Interproscan]. 0.03 OrthoFinder
PTI_15G00710.1 No alias Snf7 family [Interproscan]. 0.03 OrthoFinder
Sro2675_g334390.1 Contig965.g9898 Sorting-associated protein 32 homolog 0.04 OrthoFinder
Sro740_g195570.1 Contig168.g1896 Body protein 4B 0.03 OrthoFinder
Transcript_contig_55347 55347 Snf7 family [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0018.1 32890559 Snf7 family [Interproscan]. 0.04 OrthoFinder
XM_002502247.1 MICPUN_108335, 108335 Snf7 family [Interproscan]. 0.03 OrthoFinder
XM_003064005.1 MicpuC2_46014, 46014 Snf7 family [Interproscan]. 0.04 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494368.1_2898 KAA8494368 Vacuolar-sorting protein snf7 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004512 inositol-3-phosphate synthase activity IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006021 inositol biosynthetic process IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005024 Snf7_fam 30 210
No external refs found!