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  5. Cre06.g280850

Cre06.g280850 (30780030)


Aliases : 30780030

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-7 component


Gene families : OG_01_0004450 (OrthoFinder) Phylogenetic Tree(s): OG0004450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g280850
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000808.43 tig00000808_g4429.t1 Protein degradation.26S proteasome.20S core... 0.2 OrthoFinder
Cz15g09020.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.09 OrthoFinder
EOD07743 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.11 OrthoFinder
OT_05G03030.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.07 OrthoFinder
PTI_00G00720.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.26 OrthoFinder
Sro43_g026090.1 Contig2453.g20075 Proteasome subunit beta type-4 (Fragment) 0.42 OrthoFinder
TP11G00860.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.25 OrthoFinder
Vocar.0002s0098.1 32890740 Proteasome, subunit alpha/beta [Interproscan]. 0.07 OrthoFinder
XM_002500977.1 MICPUN_107947, 107947 Proteasome, subunit alpha/beta [Interproscan]. 0.1 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494525.1_3055 KAA8494525 Proteasome subunit beta type-4 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 67 251
No external refs found!