1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre06.g279000

Cre06.g279000 (30779585)


Aliases : 30779585

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component


Gene families : OG_01_0001472 (OrthoFinder) Phylogenetic Tree(s): OG0001472_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g279000
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001098.5 tig00001098_g7056.t1 Protein degradation.26S proteasome.20S core... 0.17 OrthoFinder
Cz09g26290.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
Cz16g07050.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.08 OrthoFinder
EOD14976 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
OT_01G03130.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.03 OrthoFinder
OT_14G00030.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.11 OrthoFinder
PTI_04G04470.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.19 OrthoFinder
Sro209_g087240.1 Contig4070.g31195 Beta type-6-A like protein 0.27 OrthoFinder
TP04G06060.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.2 OrthoFinder
Transcript_contig_56963 56963 Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
Vocar.0002s0111.1 32891037 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
Vocar.0028s0084.1 32895721 Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
XM_002503024.1 MICPUN_59004, 59004 Proteasome, subunit alpha/beta [Interproscan]. 0.1 OrthoFinder
XM_003060786.1 MicpuC2_44601, 44601 Proteasome, subunit alpha/beta [Interproscan]. 0.09 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497752.1_6705 KAA8497752 Proteasome subunit beta type-6 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 23 203
No external refs found!