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  5. Cre06.g278256

Cre06.g278256 (30779235, RPN8)


Aliases : 30779235, RPN8

Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component


Gene families : OG_01_0003025 (OrthoFinder) Phylogenetic Tree(s): OG0003025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g278256
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000403.78 tig00000403_g338.t1 Protein degradation.26S proteasome.regulatory... 0.12 OrthoFinder
Cz09g10100.t1 No alias Rpn11/EIF3F, C-terminal [Interproscan]. 0.13 OrthoFinder
OT_06G03930.1 No alias Rpn11/EIF3F, C-terminal; JAB1/MPN/MOV34 metalloenzyme... 0.08 OrthoFinder
PTI_01G01810.1 No alias JAB1/MPN/MOV34 metalloenzyme domain; Rpn11/EIF3F,... 0.16 OrthoFinder
Sro1985_g309420.1 Contig949.g9798 ATPase regulatory subunit 7 homolog B 0.32 OrthoFinder
TP06G02090.1 No alias JAB1/MPN/MOV34 metalloenzyme domain; Rpn11/EIF3F,... 0.2 OrthoFinder
Transcript_contig_55600 55600 Rpn11/EIF3F, C-terminal; JAB1/MPN/MOV34 metalloenzyme... 0.02 OrthoFinder
Vocar.0012s0064.1 32894778 Rpn11/EIF3F, C-terminal; JAB1/MPN/MOV34 metalloenzyme... 0.1 OrthoFinder
XM_003058212.1 MicpuC2_70833, 70833 Mov34/MPN/PAD-1 family protein 0.09 OrthoFinder
lcl|BLLF01000072.1_cds_GFH07068.1_1545 HaLaN_01818, GFH07068 MPN domain-containing protein 0.06 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59803.1_6253 PRW59803 26S proteasome non-ATPase regulatory subunit 7 0.04 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492984.1_2720 KAA8492984 26S proteasome non-ATPase regulatory subunit 7-like A 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0004615 phosphomannomutase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0019107 myristoyltransferase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR024969 Rpn11/EIF3F_C 165 276
IPR000555 JAMM/MPN+_dom 6 114
No external refs found!