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  5. Cre06.g278239

Cre06.g278239 (30779801)


Aliases : 30779801

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.SR30/34 splicing factor


Gene families : OG_01_0002944 (OrthoFinder) Phylogenetic Tree(s): OG0002944_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g278239
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000857.20 tig00000857_g4946.t1 RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder
Cpa|evm.model.tig00021531.8 tig00021531_g22171.t1 RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder
Cz06g08020.t1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Cz13g16010.t1 No alias RNA recognition motif domain [Interproscan]. 0.05 OrthoFinder
Dusal.0002s00035.1 33187984 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0008521 acetyl-CoA transmembrane transporter activity IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
MF GO:0071077 adenosine 3',5'-bisphosphate transmembrane transporter activity IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 135 198
IPR000504 RRM_dom 37 103
No external refs found!