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  5. Cre06.g278090

Cre06.g278090 (30778992, MRPL1)


Aliases : 30778992, MRPL1

Description : 50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000846 (OrthoFinder) Phylogenetic Tree(s): OG0000846_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre06.g278090
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.72 tig00021357_g20795.t1 50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea 0.02 OrthoFinder
Cz04g10270.t1 No alias Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.03 OrthoFinder
Dusal.0427s00003.1 33194227 Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.02 OrthoFinder
OT_12G02750.1 No alias Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.02 OrthoFinder
PTI_17G01960.1 No alias Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.02 OrthoFinder
Sro353_g124480.1 Contig1923.g16582 Protein L1 0.03 OrthoFinder
Sro51_chlor_g030330.1 Rpl1 Rpl1 0.01 OrthoFinder
XM_003058836.1 MicpuC2_26898, 26898 Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45428.1_1390 PRW45428 50S ribosomal L1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005484 SNAP receptor activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 130 298
No external refs found!