Cre06.g277801 (30778887)


Aliases : 30778887

No description available


Gene families : OG_01_0001786 (OrthoFinder) Phylogenetic Tree(s): OG0001786_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g277801
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Sro61_g035070.1 Contig3112.g24760 DNA ligase 4 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003910 DNA ligase (ATP) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
InterPro domains Description Start Stop
IPR012310 DNA_ligase_ATP-dep_cent 492 690
IPR012308 DNA_ligase_ATP-dep_N 21 162
No external refs found!