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Aliases : 30778890, HTB23
Description : Chromatin organisation.histones.H2B-type histone
Gene families : OG_01_0000102 (OrthoFinder) Phylogenetic Tree(s): OG0000102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre06.g276550 | |
| Cluster | HCCA: Cluster_33 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000944.18 | tig00000944_g5940.t1 | Chromatin organisation.histones.H2B-type histone | 0.02 | OrthoFinder | |
| Cz02g02060.t1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.21 | OrthoFinder | |
| Cz05g04190.t1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.15 | OrthoFinder | |
| Cz07g08190.t1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.19 | OrthoFinder | |
| Cz08g27120.t1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.14 | OrthoFinder | |
| Cz18g11110.t1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.15 | OrthoFinder | |
| EOD16252 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.11 | OrthoFinder | |
| EOD17479 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.11 | OrthoFinder | |
| EOD18484 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.11 | OrthoFinder | |
| EOD26824 | No alias | Putative histone H2B [Ensembl]. | 0.11 | OrthoFinder | |
| EOD34128 | No alias | Hypothetical protein [Ensembl]. | 0.05 | OrthoFinder | |
| EOD41189 | No alias | Putative histone H2B [Ensembl]. | 0.1 | OrthoFinder | |
| OT_08G01920.1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.09 | OrthoFinder | |
| OT_12G00920.1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.07 | OrthoFinder | |
| PTI_06G02120.1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.19 | OrthoFinder | |
| PTI_06G04930.1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.07 | OrthoFinder | |
| Sro1535_g280540.1 | Contig3021.g24091 | Histone H2B | 0.07 | OrthoFinder | |
| Sro1563_g282700.1 | Contig1017.g10180 | Histone H2B | 0.08 | OrthoFinder | |
| Sro228_g092710.1 | Contig1235.g11585 | Histone H2B | 0.13 | OrthoFinder | |
| Sro470_g149440.1 | Contig850.g9338 | Histone H2B | 0.17 | OrthoFinder | |
| TP05G07690.1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.05 | OrthoFinder | |
| Vocar.0001s0460.1 | 32886156 | Histone H2A/H2B/H3 [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0001s0881.1 | 32885389 | Histone H2A/H2B/H3 [Interproscan]. | 0.04 | OrthoFinder | |
| Vocar.0002s0392.1 | 32891126 | Histone H2A/H2B/H3 [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0005s0053.1 | 32884040 | Histone H2A/H2B/H3 [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0016s0272.1 | 32898185 | Histone H2A/H2B/H3 [Interproscan]. | 0.04 | OrthoFinder | |
| Vocar.0016s0281.1 | 32897879 | Histone H2A/H2B/H3 [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0027s0139.1 | 32887089 | Histone H2A/H2B/H3 [Interproscan]. | 0.06 | OrthoFinder | |
| Vocar.0027s0148.1 | 32887083 | Histone H2A/H2B/H3 [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0028s0099.1 | 32895722 | Histone H2A/H2B/H3 [Interproscan]. | 0.06 | OrthoFinder | |
| XM_002503927.1 | MICPUN_108622, 108622 | Histone H2B | 0.03 | OrthoFinder | |
| XM_003055466.1 | MicpuC2_13212, 13212 | Histone H2B | 0.09 | OrthoFinder | |
| XM_003058473.1 | MicpuC2_58125, 58125 | Histone H2A/H2B/H3 [Interproscan]. | 0.16 | OrthoFinder | |
| XM_003061989.1 | MicpuC2_35705, 35705 | Histone H2A/H2B/H3 [Interproscan]. | 0.07 | OrthoFinder | |
| lcl|LHPG02000002.1_cds_PRW60378.1_4501 | PRW60378 | Histone H2B | 0.05 | OrthoFinder | |
| lcl|LHPG02000007.1_cds_PRW56968.1_9099 | PRW56968 | Histone | 0.04 | OrthoFinder | |
| lcl|LHPG02000007.1_cds_PRW57107.1_9026 | PRW57107 | Histone | 0.03 | OrthoFinder | |
| lcl|LHPG02000007.1_cds_PRW57308.1_9005 | PRW57308 | Histone | 0.04 | OrthoFinder | |
| lcl|LHPG02000007.1_cds_PRW57429.1_9063 | PRW57429 | Histone | 0.04 | OrthoFinder | |
| lcl|LHPG02000018.1_cds_PRW33046.1_3813 | PRW33046 | Histone | 0.04 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8498015.1_6968 | KAA8498015 | Histone H2B type 1-M | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006325 | chromatin organization | IEP | Enrichment |
| BP | GO:0006334 | nucleosome assembly | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0034728 | nucleosome organization | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Enrichment |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007125 | Histone_H2A/H2B/H3 | 7 | 129 |
| No external refs found! |