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  5. Cre06.g272950

Cre06.g272950 (30778811, RPS18)


Aliases : 30778811, RPS18

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS18 component


Gene families : OG_01_0002223 (OrthoFinder) Phylogenetic Tree(s): OG0002223_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre06.g272950
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cz03g21050.t1 No alias Ribosomal protein S13 [Interproscan]. 0.25 OrthoFinder
Dusal.0003s00026.1 33187489 Ribosomal protein S13 [Interproscan]. 0.14 OrthoFinder
EOD07550 No alias Ribosomal protein S13 [Interproscan]. 0.34 OrthoFinder
EOD24485 No alias Ribosomal protein S13 [Interproscan]. 0.34 OrthoFinder
OT_14G03080.1 No alias Ribosomal protein S13 [Interproscan]. 0.18 OrthoFinder
PTI_23G01020.1 No alias Ribosomal protein S13 [Interproscan]. 0.54 OrthoFinder
Sro2117_g315240.1 Contig3258.g25694 40S ribosomal protein S18 0.58 OrthoFinder
SymbC1.scaffold24401.1 24401.1 Ribosomal protein S13 [Interproscan]. 0.07 OrthoFinder
SymbC1.scaffold6247.1 6247.1 Ribosomal protein S13 [Interproscan]. 0.03 OrthoFinder
TP02G00280.1 No alias Ribosomal protein S13 [Interproscan]. 0.47 OrthoFinder
Vocar.0002s0337.1 32891179 Ribosomal protein S13 [Interproscan]. 0.3 OrthoFinder
XM_002505702.1 MICPUN_109369, 109369 Ribosomal protein S18 (RPS18) 0.37 OrthoFinder
XM_003063744.1 MicpuC2_49747, 49747 Ribosomal protein S18 (RPS18) 0.14 OrthoFinder
lcl|BLLF01000380.1_cds_GFH11171.1_5648 HaLaN_06627, GFH11171 Ribosomal protein S18 0.05 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56629.1_9755 PRW56629 40S ribosomal S18 0.27 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495014.1_3544 KAA8495014 40S ribosomal protein S18 0.17 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 15 142
No external refs found!