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  5. Cre06.g270100

Cre06.g270100 (30779786, SBE2)


Aliases : 30779786, SBE2

Description : Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme


Gene families : OG_01_0000579 (OrthoFinder) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g270100
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Dusal.0572s00007.1 33202694 Alpha-amylase/branching enzyme, C-terminal all beta... 0.02 OrthoFinder
Dusal.2421s00002.1 33189101 Hypothetical protein 0.02 OrthoFinder
EOD23951 No alias Glycoside hydrolase, family 13, N-terminal [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002288.1_cds_GFH23505.1_17982 HaLaN_21125, GFH23505 Aamy domain-containing protein 0.05 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60631.1_4500 PRW60631 Starch branching enzyme I 0.02 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493637.1_4399 KAA8493637 1,4-alpha-glucan-branching enzyme 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 351 431
IPR006048 A-amylase/branching_C 744 839
IPR004193 Glyco_hydro_13_N 188 276
No external refs found!