Cre06.g267100 (30778457, SRP68)

Aliases : 30778457, SRP68

Description : Protein translocation.endoplasmic insertion system.SRP (signal recognition particle) complex.SRP68 component

Gene families : OG_01_0003361 (OrthoFinder) Phylogenetic Tree(s): OG0003361_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Cre06.g267100
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.161 tig00020554_g10940.t1 Protein translocation.endoplasmic... 0.01 OrthoFinder
Cz05g00050.t1 No alias Signal recognition particle subunit SRP68 [Interproscan]. 0.05 OrthoFinder
Sro275_g105650.1 Contig3464.g26867 Particle subunit SRP68 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56110.1_10055 PRW56110 Signal recognition particle subunit SRP68 isoform A 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499878.1_8831 KAA8499878 Signal recognition particle subunit SRP68 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005047 signal recognition particle binding IEA Interproscan
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEA Interproscan
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA Interproscan
MF GO:0008312 7S RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005484 SNAP receptor activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR026258 SRP68 38 655
No external refs found!