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  5. Cre06.g266416

Cre06.g266416 (30779154)


Aliases : 30779154

Description : DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000129 (OrthoFinder) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre06.g266416
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021094.26 tig00021094_g18111.t1 DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz05g07080.t1 No alias Helicase, C-terminal; Domain of unknown function... 0.02 OrthoFinder
Cz19g09190.t1 No alias Helicase, C-terminal; Domain of unknown function... 0.04 OrthoFinder
OT_02G03850.1 No alias Helicase-associated domain; Helicase, C-terminal;... 0.03 OrthoFinder
OT_02G05340.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain; RWD... 0.04 OrthoFinder
Sro1790_g297740.1 Contig4724.g35072 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic 0.01 OrthoFinder
Vocar.0002s0213.1 32890657 Domain of unknown function DUF1605; DEAD/DEAH box... 0.02 OrthoFinder
XM_003056713.1 MicpuC2_697, 697 Helicase, C-terminal; Helicase-associated domain; Domain... 0.02 OrthoFinder
XM_003064367.1 MicpuC2_43509, 43509 Helicase, C-terminal; Helicase-associated domain; Domain... 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58696.1_7838 PRW58696 Helicase domain-containing 0.04 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20239.1_5726 PRW20239 ATP-dependent RNA helicase DHX36 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000339 RNA cap binding IEP Enrichment
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR011709 DUF1605 756 846
IPR001650 Helicase_C 280 417
IPR007502 Helicase-assoc_dom 559 648
No external refs found!