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  5. Cpa|evm.model.tig00000388.18

Cpa|evm.model.tig00000388.18 (tig00000388_g24781.t2)


Aliases : tig00000388_g24781.t2

Description : RNA biosynthesis.transcriptional activation.NIN-like superfamily.RKD transcription factor


Gene families : OG_01_0000093 (OrthoFinder) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000388.18
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Cz11g29090.t1 No alias RWP-RK domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_53880 53880 RWP-RK domain [Interproscan]. 0.01 OrthoFinder
XM_002502488.1 MICPUN_105591, 105591 RWP-RK domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004857 enzyme inhibitor activity IEP Enrichment
MF GO:0004866 endopeptidase inhibitor activity IEP Enrichment
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0030414 peptidase inhibitor activity IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0061134 peptidase regulator activity IEP Enrichment
MF GO:0061135 endopeptidase regulator activity IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 21 67
No external refs found!