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  5. Cpa|evm.model.tig00000383.96

Cpa|evm.model.tig00000383.96 (tig00000383_g24706.t1)


Aliases : tig00000383_g24706.t1

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.type-1A topoisomerase TOP3b


Gene families : OG_01_0001163 (OrthoFinder) Phylogenetic Tree(s): OG0001163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000383.96
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
EOD24426 No alias TOPRIM domain; DNA topoisomerase, type IA, central... 0.01 OrthoFinder
TP23G01460.1 No alias DNA topoisomerase, type IA, central; TOPRIM domain... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003916 DNA topoisomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR006171 TOPRIM_domain 5 180
IPR013497 Topo_IA_cen 195 422
No external refs found!