Cre05.g234665 (30783487, AP4B4)


Aliases : 30783487, AP4B4

Description : Vesicle trafficking.endomembrane trafficking.vacuolar sorting.AP-4 vacuole cargo adaptor complex.AP4B large beta subunit


Gene families : OG_01_0000809 (OrthoFinder) Phylogenetic Tree(s): OG0000809_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre05.g234665
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020592.38 tig00020592_g11671.t1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder
Cz02g23050.t1 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal;... 0.05 OrthoFinder
Cz14g09210.t1 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal;... 0.03 OrthoFinder
Dusal.0611s00004.1 33198402 Beta-adaptin appendage, C-terminal subdomain;... 0.06 OrthoFinder
EOD14985 No alias Adaptor protein 2 beta subunit 1 [Ensembl]. 0.08 OrthoFinder
PTI_00G04320.1 No alias Beta-adaptin appendage, C-terminal subdomain;... 0.03 OrthoFinder
PTI_13G02480.1 No alias Beta-adaptin appendage, C-terminal subdomain;... 0.03 OrthoFinder
Sro413_g138080.1 Contig3915.g30008 AP-1 complex subunit beta-1 0.06 OrthoFinder
Sro413_g138080.2 No alias Beta-adaptin appendage, C-terminal subdomain [Interproscan]. 0.02 OrthoFinder
Sro951_g223960.1 Contig3277.g25794 AP-1 complex subunit beta-1 0.06 OrthoFinder
TP04G02380.1 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal;... 0.02 OrthoFinder
TP09G00880.1 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal;... 0.02 OrthoFinder
Vocar.0027s0022.1 32887254 Beta-adaptin appendage, C-terminal subdomain;... 0.03 OrthoFinder
XM_003058041.1 MicpuC2_16312, 16312 Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.02 OrthoFinder
lcl|BLLF01000741.1_cds_GFH14559.1_9036 HaLaN_10639, GFH14559 B2-adapt-app_C domain-containing protein 0.05 OrthoFinder
lcl|BLLF01000741.1_cds_GFH14560.1_9037 HaLaN_10640, GFH14560 Adaptin_N domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000916.1_cds_GFH15891.1_10368 HaLaN_12212, GFH15891 AP complex subunit beta 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 33 535
IPR015151 B-adaptin_app_sub_C 897 1016
No external refs found!