Cre04.g222700 (30791597)

Aliases : 30791597

Description : ABC transporter F family member 1 OS=Arabidopsis thaliana

Gene families : OG_01_0000392 (OrthoFinder) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre04.g222700
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
Cz13g02110.t1	No alias	Four helical bundle domain; ABC transporter-like [Interproscan].	0.04	OrthoFinder
Dusal.0160s00022.1	33188332	ABC transporter-like; Four helical bundle domain [Interproscan].	0.02	OrthoFinder
EOD12238	No alias	Hypothetical protein [Ensembl].	0.04	OrthoFinder
EOD13110	No alias	ABC transporter-like [Interproscan].	0.03	OrthoFinder
OT_02G04850.1	No alias	ABC transporter-like [Interproscan].	0.03	OrthoFinder
OT_15G00690.1	No alias	Chromo domain; ABC transporter-like [Interproscan].	0.02	OrthoFinder
PTI_09G04380.1	No alias	ABC transporter-like [Interproscan].	0.01	OrthoFinder
Sro1610_g285810.1	Contig4416.g33186	[NU+] prion formation protein 1	0.04	OrthoFinder
Sro672_g185120.1	Contig919.g9660	[NU+] prion formation protein 1	0.04	OrthoFinder
SymbC1.scaffold793.3	793.3	ABC transporter-like [Interproscan].	0.01	OrthoFinder
TP05G07430.1	No alias	Hypothetical protein	0.02	OrthoFinder
Vocar.0025s0015.1	32898331	ABC transporter-like [Interproscan].	0.02	OrthoFinder
lcl\|BLLF01000351.1_cds_GFH10832.1_5309	HaLaN_06220, GFH10832	ABC transporter-like [Interproscan].	0.02	OrthoFinder
lcl\|BLLF01001331.1_cds_GFH18635.1_13112	HaLaN_15471, GFH18635	ABC transporter-like [Interproscan].	0.02	OrthoFinder
lcl\|BLLF01001640.1_cds_GFH20464.1_14941	HaLaN_17589, GFH20464	ABC transporter-like [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
MF	GO:0016829	lyase activity	IEP	Enrichment
MF	GO:0016830	carbon-carbon lyase activity	IEP	Enrichment
MF	GO:0016832	aldehyde-lyase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	712	938
IPR003439	ABC_transporter-like_ATP-bd	460	592

External Links

No external refs found!