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  5. Cre04.g215650

Cre04.g215650 (30791274)


Aliases : 30791274

Description : DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE4 Kleisin-like bridging component


Gene families : OG_01_0002212 (OrthoFinder) Phylogenetic Tree(s): OG0002212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre04.g215650
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Sro2_g001790.1 Contig467.g6337 Non-structural maintenance of chromosome element 4,... 0.02 OrthoFinder
Transcript_contig_58535 58535 Non-structural maintenance of chromosome element 4,... 0.02 OrthoFinder
XM_002500488.1 MICPUN_56977, 56977 Non-structural maintenance of chromosome element 4,... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR014854 Nse4_C 216 308
No external refs found!