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  5. Cpa|evm.model.tig00000383.21

Cpa|evm.model.tig00000383.21 (tig00000383_g24632.t1)


Aliases : tig00000383_g24632.t1

No description available


Gene families : OG_01_0004222 (OrthoFinder) Phylogenetic Tree(s): OG0004222_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000383.21
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cre17.g701050 30781632 No description available 0.08 OrthoFinder
Cz03g20200.t1 No alias Zinc finger, C2H2, LYAR-type; Zinc-finger of C2H2 type... 0.05 OrthoFinder
EOD24439 No alias Zinc finger, C2H2, LYAR-type [Interproscan]. 0.05 OrthoFinder
EOD25623 No alias Zinc finger, C2H2, LYAR-type [Interproscan]. 0.03 OrthoFinder
PTI_02G05820.1 No alias Zinc finger, C2H2, LYAR-type [Interproscan]. 0.09 OrthoFinder
Sro361_g126460.1 Contig1094.g10571 Cell growth-regulating nucleolar protein 0.05 OrthoFinder
TP06G02790.1 No alias Zinc finger, C2H2, LYAR-type [Interproscan]. 0.06 OrthoFinder
Vocar.0004s0208.1 32889821 Zinc finger, C2H2, LYAR-type [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61446.1_312 PRW61446 UBP1-associated s 1C 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR014898 Znf_C2H2_LYAR 30 59
No external refs found!